miura/ImageJMacro_Highlighter

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10
Rank 1,802,903 (Top 36 %)
Language
Vim Script
Created almost 14 years ago
Updated almost 11 years ago

miura/ImageJMacro_Highlighter

miura

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syntax high lighter for ImageJ macro, for vim and Notepad++

ij_textbook2

CMCI textbook 2, for ImageJ macro course

reproducible_bioimage_analysis

NEUBIAS_AnalystSchool2020

Jupyter Notebook

MultiStackRegistration

Modified version of MultiStackRegistration, for use from scripts.

NEUBIAS_AnalystSchool2018

NEUBIAS Bioimage Analyst School Documentation

ij_textbook1

textbook for the CMCI course (part 1)

NEUBIAS_Bioimage_Analyst_Course2017

NEUBIAS_AnalystSchool2019

NEUBIAS Bioimage Analyst School 2019

Jupyter Notebook

GLCM2

calculates GLCM, to make it friendly for scripting.

NucleusRimIntensityMeasurementsV2

ParticleTrackerExt

add data export directly to Result table

pygments_lexer_IJmacro

CourseUtil

EMBL Image Processing and Analysis Course samples, links and plugins.

ijmacros

ImageJ macros, javascripts and jython codes for image processing and analysis

BFImageConv

modified image converter for Ruben

3Dviewer_TrackVisualization

3D-DotDetection

Scripts

Python and IgorPro Procedure Files (for now)

vec9

optical flow estimation with 2D time series

CorrectBleach_

a collection of bleach correction methods

BoryProject

segmentation and 3d linking (http://cmci.github.io/BoryProject/)

DotLinker

linking segmented dots

JacobImaris

imagestab

Extend Image Stabilizer ImageJ plugin, registration based on Lukas-Kanade gradient method.

IJ_BCautoMacro

Automatic contrast enhancement, ImageJ macro version.

try_git

RadialProfileV2

RadialProfile Plugin of ImageJ upgraded for use from ImageJ macro and Javascript.

saiboukougaku

IJ_DropMacro

WorkflowAndComponents-TheNEUBIASConcepts

ServerIJ

LauncherForRemoteImageJ

tango

ImageJ plugin TANGO - Tools for Analysis of Nuclear Genome Organization

CourseModules

collection of teaching materials

directionalityPractical

practical course protocol for EMBO 2011 cell biology course, 2012 Predoc course

ij-clust

various scripts for using CUI ImageJ

emblTools

misc functionalities