jsa-aerial/Aerial

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Created over 13 years ago
Updated over 13 years ago

jsa-aerial/Aerial

jsa-aerial

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Aerial graph/model db

hanami

Interactive arts and charts plotting with Clojure(Script) and Vega-lite / Vega. Flower viewing 花見 (hanami)

saite

Interactive document creation for exploratory graphics and visualizations. 咲いて (in bloom). Built on top of hanami vega/vega-lite library with CodeMirror and self hosted ClojureScript

hanasu

A very light weight, simple websocket based messaging system in Clojure(Script). Converse/talk 話す(hanasu).

DMM

Data Flow Matrix Machines. Generalization of recurrent neural networks.

aerobio

Extensible full DAG streaming computation server with services and jobs for RNA-Seq, Tn-Seq, WG-Seq and Term-Seq.

gaisr

Genomic Analysis Illuminating Structured RNA

js-local-vcf

Javascript local VCF and Tabix index file parsing and processing

aerial.utils

Various utility functionality covering common tasks; trees; clustering; graphs; probability, stats, and information theory, et.al.

js-local-bam

Javascript local BAM and BAI index file parsing and processing

JS-Binary-VCF-Tabix

JavaScript BGZF VCF and binary Tabix readers

bbhanami

Bare Bones example Hanami client/server app

jsbgzf

Javascript bgzf inflation and deflation

clj-iobio

A robust, flexible, full program DAG, declarative tool definition, extensible toolset iobio server in Clojure. With function nodes, streaming and non streaming flow, dynamic caching, logging, and superior error handling.

pyhanasu

Hanasu for Python

msgpacket

Client<->Server/Peer<->Peer message protocol and implementations

aerial.bio.utils

Various bioinformatic general utility tools for unified file reading, sequence xform, sequence entropy information processing , et.al.