bionode/bionode-watermill-tutorial

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Created over 7 years ago
Updated over 6 years ago

bionode/bionode-watermill-tutorial

bionode

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This is a tutorial for bionode-watermill

bionode

Modular and universal bioinformatics

bionode-ncbi

Node.js module for working with the NCBI API (aka e-utils).

bionode-watermill

💧Bionode-Watermill: A (Not Yet Streaming) Workflow Engine

bionode-fasta

Streamable FASTA parser.

bionode-seq

Module for DNA, RNA and protein sequences manipulation

bionode-template

A base template for quickly creating bionode modules.

bionode-go

Gene Ontology in Bionode (WIP)

bionode-bwa

A Node.js wrapper for the Burrow-Wheeler Aligner (BWA).

bionode-examples

Bionode usage example files

fasta-parser

Buffer Stream parser from FASTA to JSON.

bionode-sra

Node.js wrapper for SRA Toolkit

bionode-sam

Node.js wrapper for samtools.

biohacker

A nodeschool workshop that gives some usage examples of bionode for bioinformatics

bionode-vcf

vcf parser using javascript

bionode-bbi

Fetcher for BBI files (bigWig and bigBed).

gsoc16

GSoC Project: Streaming Workflow Engine

bionode-gff

bionode-obo

Streaming OBO 1.2 Parser

bionode.io

Bionode website

bionode-fastq

Streamable FASTQ parser

biopkgs

Custom Nix packages not yet available on NixOS/nixpkgs

github-project-public

Make GitHub project board visible to non members

bionode-quickgo

Acess EBI QuickGO REST API with promises and streams.

bionode-blast

NodeJS API wrapping the NCBI BLAST Common URL API. WIP.

bionode-sge