Discover JohannesBuchner/COVID-19-analysis Open Source project

Fit and compare complex models reliably and rapidly. Advanced nested sampling.

181

UltraNest

Improve the language of your paper before submission

131

languagecheck

Java implementation of UDT (based on http://udt-java.sf.net by Bernd Schuller's)

udt-java

A large, free audio sample database (10M words pronounced), a test bed for voice activity detection algorithms and for single-syllable word recognition

spoken-command-recognition

PAQ is a series of archivers that achieve very high compression rates at the expense of speed and memory

paq

nway -- Bayesian cross-matching of astronomical catalogues

nway

Bayesian X-ray analysis (nested sampling for Xspec and Sherpa)

BXA

Linearize research papers into readable ebooks.

research2epub

Searches your emails for flight tickets & displays a summary with all flight details

flight-reservation-emails

Perl

DHCProbe

Send a DHCP request to DHCP server to check its configuration

Shell

Jarsync

Java implementation of the Rsync protocol based on Jarsync by Casey Marshall

sketchy, imprecise plotting theme for matplotlib

matplotlib-xkcdify

Combines Bayesian analyses from many datasets.

PosteriorStacker

(local, outdated copy) libnova is a general purpose, double precision, Celestial Mechanics, Astrometry and Astrodynamics library.

libnova

PLUTO

PLUTO - A modular code for computational astrophysics

regulargrid

Regular Grid Multivariate linear interpolation

Filesystem in User Space (fuse) using compressed and encrypted chunks

chunk-fuse

Solution to LSST-PLAsTiCC photometric transient classification challenge

LSST-PLAsTiCC-classification-solution

X-ray absorption re-emission scattering - Monte Carlo simulator for X-ray obscurers

xars

Python API for building EPUB books

python-epub-builder

CONDOR (COnstrained, Non-linear, Direct, parallel Optimization using trust Region method for high-computing load function) allows continuous parameter optimization

condor_optimization

Cuba - a library for multidimensional numerical integration

cuba

Jake

Collaborating on a project for ordinary people

Zwickys Morphological Analysis implemented in Python

zwicky-morphological-analysis

Ray tracing / Line intersection formulas for various 2d and 3d objects

intersection

Graduate-level course: "Practical Inference for Researchers in the Physical Sciences"

PracticalInferenceForResearchersInThePhysicalSciencesCourse

Fast Fourier transform at nonequispaced nodes

nfft

massivedatans

Big Data vs. complex physical models - a scalable nested sampling inference algorithm for many data sets

PinNUTS🥜 is dynamic Hamiltonian Monte Carlo algorithm implemented in Python

PinNUTS

Pythonic Nested Sampling Development Framework & UltraNest

nested-sampling

Fit and compare complex models quickly. Laplace Approximation, Variational Bayes, Importance Sampling.

snowline

Run MCMC automatically to convergence

autoemcee

Digest Authorization Proxy Server

digestaps

UltraGem is a match three board game (Bejeweled/CandyCrush clone), with an advanced automated solver

ultragem

Automatically generate playlists of similar music

PyMirage

hmf

Halo Mass Function in Python

MCL - a cluster algorithm for graphs (from http://micans.org/mcl/)

mcl

bexvar

Bayesian excess variance for Poisson data time series with backgrounds.

A Dynamic Process Re-nicer

verynice

fasterscipydists

fasterscipydists provides faster scipy.stats distributions

A SED-fitting code developed by cigale.lam.fr

cigale

Helps you find popular, cheap (bandwidth-wise) and new torrents

fresh-torrents

Recipes and codes for common statistics problems

astrostatistics-recipes

Fork of multitalk, a nonlinear presentation software

multitalk

Notebooks investigating in some statistical analysis methods.

astrostatistics-case-studies

Compression of large sets/databases of images

imagestack

Calculator for occultation of celestial objects by the moon or planetary bodies

lunar-occulation-calculator

Uncertainty visualisation in maps: Display measurement value and error simultaneously with Python/matplotlib

uncertaincolors

Shows rsync file progress and total progress as a progress bar.

rsync-progress

Poisson error bars for low count statistics, detection significances.

poissonregime

Bayesian correlation swiss army knife

pymultinest-tutorial

pymultinest tutorial

JavaScript

syscorr

Automated Parameter Estimation and Model Selection Toolkit -- A fast MCMC implementation for Bayesian inference

APEMoST

RMultiNest

R wrapper for MultiNest

Replace f-strings with Python<3.6 compatible alternatives

fstring-downgrade

High-dimensional Integration Library

HIntLib

A naive constrained continuous n-dimensional optimization algorithm

nobrain_optimization

note3

Notational Velocity clone written with Jython+SWT

Chombo - Software for Adaptive Solutions of Partial Differential Equations

Chombo3.2

RainbowLasso compiles matched aperture fluxes from ultraviolet to infrared for all-sky surveys.

RainbowLasso

Makefile

ics

The Interclient Communication Service provides low-level clients communication methods

archived: merged into BXA! (was: Machine-learned parametric model for background spectra)

autobackgroundmodel

Ray tracing of hydrodynamic simulations to compute column densities

LightRayRider

Strips cython code (.pyx files) down to python code for code analysis tools.

uncythonize

Cython

output of Student Skill Sharpening Sessions

HTML progress reports for DoIt

doithtml

HTML

CmdStanCache

Caches Stan MCMC for quicker model iterations and enhanced productivity

Interactive web pages for scientific computing with python

webscipy

outdated and incorrect (was: Information Criteria for Stan outputs)

ic4stan

Python connection to Diffusive Nested Sampling.

PyDNest

A desktop search engine kept fast and simple

spuren

My little GBM software library

spectralTools

AvailableLaterObjects simplify writing asynchronous calls by decoupling the result and hiding Thread creation.

availablelater

A pure-PHP Mediawiki to HTML converter

mediawiki2html_machine

PHP

activitytracker

Track what you are spending your time on

RV exoplanet fitting code based on ExoFit

exofind

Fast interpolation/integration for monotonically increasing numpy arrays

npyinterp

xray-data-analysis-docker

Make CIAO and HEASOFT docker images

Shell

fss

A computer-independent view and addressing scheme of a common folder.

Brings podcasts, vodcasts and other RSS feeds to Mastodon

podcast2toot

Common Password Topologies

PasswordTopologies

Visualisation of the Structure of Active Galactic Nuclei

agnviz

MCMC Posterior Sample Error Propagation

posterierr

Search ADS by reference "Lastname et al. (2019)"

ads-reference-search

stagedstan

Staged Stan Python package

Fun things you can do with UltraNest

ultranest-experiments

Code accompaning the paper "Comparison of Step Samplers for Nested Sampling"

paper-nested-sampling-stepsampler-comparison

pyFC: A fractal cube construction and analysis module - cloned from http://www2.ccs.tsukuba.ac.jp/Astro/Members/ayw/code/pyFC/index.html

pyfc

mnsf

spectral fitting

Research presentations on Astronomy and Astrostatistics

presentations

Converting Java projects to Maven without breaking Upstream

externals

Shell

pystrict3

pystrict3 analyses code for sanity and plausibility. Checks whether function calls are plausible and docstrings match function signatures.