Biophysics Group at the University of Erlangen-Nuremberg (@fabrylab)
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Top repositories

1

pyTFM

2 dimensional particle image velocimetry, traction force microscopy and monolayer stress microscopy
Python
22
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2

clickpoints

Click Points is a program written in the Python programming language, which serves on the one hand as an image viewer and on the other hand as an data display and annotation tool. Every frame can be annotated by a description, marked points/tracks, or marked areas (paint brush). This helps to view image data, do manual evaluation of data, help to create semi-automatic evaluation or display the results of automatic image evaluation.
Python
16
star
3

shear_flow_deformation_cytometer

Python
4
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4

3D_piv_example_data

A simple data set for 3D Particel Image Veolcimetry
3
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5

yolo-deformation-cytometer

1
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6

spheroid_invasion_assay

Invasiveness of 3D spheroids using the radial cell density profile.
Python
1
star
7

Deformation_Cytometer

a low cost easy to use deformation cytometer
Jupyter Notebook
1
star
8

fiber-orientation

Evaluates fiber orientation
Jupyter Notebook
1
star