fabrylab/spheroid_invasion_assay

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Created over 4 years ago
Updated about 4 years ago

fabrylab/spheroid_invasion_assay

fabrylab

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Invasiveness of 3D spheroids using the radial cell density profile.

pyTFM

2 dimensional particle image velocimetry, traction force microscopy and monolayer stress microscopy

clickpoints

Click Points is a program written in the Python programming language, which serves on the one hand as an image viewer and on the other hand as an data display and annotation tool. Every frame can be annotated by a description, marked points/tracks, or marked areas (paint brush). This helps to view image data, do manual evaluation of data, help to create semi-automatic evaluation or display the results of automatic image evaluation.

shear_flow_deformation_cytometer

3D_piv_example_data

A simple data set for 3D Particel Image Veolcimetry

yolo-deformation-cytometer

Deformation_Cytometer

a low cost easy to use deformation cytometer

Jupyter Notebook

fiber-orientation

Evaluates fiber orientation

Jupyter Notebook