@carpenterlab
Guthub

carpenterlab

Twitter logo Share LinkedIn logo Share Facebook logo Share

Top repositories

1

2021_Haghighi_NatureMethods

High-Dimensional Gene Expression and Morphology Profiles of Cells across 28,000 Genetic and Chemical Perturbations
Jupyter Notebook
33
star
2

2019_caicedo_dsb

Analysis of results of the Data Science Bowl 2018
Jupyter Notebook
20
star
3

2016_Bray_NatureProtocols

Supporting data files, documentation, and updated tips for the Cell Painting protocol
19
star
4

2019_Caicedo_CytometryA

Evaluation of Deep Learning Strategies for Nucleus Segmentation in Fluorescence Images
Jupyter Notebook
13
star
5

2016_Pawlowski_MLCB

Supporting materials for automated morphological profiling using pre-trained deep convolutional networks
Jupyter Notebook
8
star
6

2022_Cimini_NatureProtocols

Jupyter Notebook
7
star
7

2018_McQuin_PLOSBio

6
star
8

open-science-rules

Collaboratively written manuscript discussing Ten Simple Rules for Enabling Open Science in Biomedical Research
HTML
5
star
9

2018_Rohban_NatComm

Capturing single-cell heterogeneity via data fusion improves image-based profiling
R
4
star
10

puma_project

Predicting assays Using Morphological Analysis
Jupyter Notebook
3
star
11

2022_Rohban_CellSystems

HTML
2
star
12

2017_Rohban_eLife

R
2
star
13

2019_Doan_CytometryA

Label-free monitoring of acute lymphoblastic leukemia by computer vision
Python
2
star
14

2019_carpenter_eliceiri_ibiology

Information about iBiology's freely available animation of a deep convolution neural network
1
star
15

2019_Doan_PNAS

Label-free assessment of red blood cell storage lesions by deep learning
Jupyter Notebook
1
star