EpiModel Research Lab (@EpiModel)
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EpiModel

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  • Stars
    star
    365
  • Global Org. Rank 28,598 (Top 10 %)
  • Registered over 7 years ago
  • Most used languages
    R
         83.9 %
    Shell
         9.7 %
    HTML
         6.5 %
  • Location 🇺🇸 United States
  • Country Total Rank 18,650
  • Country Ranking
    R
         140
    Shell
         6,843

Top repositories

1

EpiModel

Mathematical Modeling of Infectious Disease Dynamics
R
236
star
2

EpiModel-Gallery

Gallery of Network-Based Epidemic Model Templates for EpiModel
R
52
star
3

EpiModelHIV

Network Models of HIV Transmission Dynamics among MSM and Heterosexuals
R
23
star
4

ARTnet

Network and Epidemic Parameterization with the ARTnet Study Data
R
10
star
5

COVID-CruiseShip

Network Model of COVID-19 on Cruise Ships
Shell
8
star
6

EpiModelCOVID

Network-Based Epidemic Modeling of Transmission Dynamics for SARS-CoV-2
R
8
star
7

EpiModelHPC

High-Performance Computing Extensions for EpiModel
R
6
star
8

EpiModeling

Tutorials for Using the EpiModel Software Platform for Research
R
4
star
9

EpiABC

Approximate Bayesian Computation for EpiModel on High-Performance Computing Clusters
R
3
star
10

EpiModelHIV-Template

Template repository for EpiModelHIV Projects
R
3
star
11

PrEP-HIV-Sorting

An analysis of population-level sexual mixing by diagnosed HIV status and pre-exposure prophylaxis use among men who have sex with men in the United States.
R
3
star
12

injectable-prep

A Mathematical Model of Long-Acting Injectable and Daily-Oral Pre-Exposure Prophylaxis
Shell
3
star
13

SexualDistancing

Opportunities for HIV/STI Control During Sexual Distancing of the COVID-19 Global Pandemic
R
2
star
14

NetStats

Sexual Networks of Men Who Have Sex with Men in the United States
R
2
star
15

HIV-Risk-Comp

Modeling Risk Compensation after PrEP Initiation among MSM
R
2
star
16

slurmworkflow_tester

R
2
star
17

CombPrev

Combination HIV Prevention among Atlanta MSM
Shell
2
star
18

CombPrevNet

The Role of HIV Partner Services in the Modern Biomedical HIV Prevention Era
R
2
star
19

slurmworkflow

R
2
star
20

PrEPGuidelines

Impact of CDC’s HIV Preexposure Prophylaxis Guidelines among MSM in the United States
R
2
star
21

networkLite

An Simplified Implementation of the network Package Functionality
R
1
star
22

STI-Testing-Rates

Bacterial STI Screening Rates by Symptomatic Status among Men Who Have Sex with Men in the United States: A Hierarchical Bayesian Analysis
R
1
star
23

EpiModelHIVhet

Mathematical Modeling for HIV Transmission Dynamics among Heterosexuals
R
1
star
24

stitestguidelines

STI Screening among Men who have Sex with Men
R
1
star
25

PAFGuidelines

Population Attributable Fraction of STI Screening Interventions on HIV Incidence
HTML
1
star
26

swfcalib

R
1
star
27

stiPrEP

Impact of PrEP on GC/CT Incidence among MSM in the US
R
1
star
28

sti_paf

Population Attributable Fraction of STIs on HIV Incidence
R
1
star
29

NetAnalysis-SF-ATL

HIV/STI epidemic potential in dynamic sexual networks of MSM in San Francisco and Atlanta
R
1
star
30

EpiModel-Utilities

EpiModel related software not housed anywhere else
R
1
star
31

PrEP-Optimize

Optimal Allocation of HIV PrEP Initiation, Adherence, and Persistence Interventions
HTML
1
star