Pablo Cordero (@dimenwarper)

Top repositories

1

awesome-bayes

List of resources for bayesian inference
150
star
2

chainlearn

Mini module with syntax sugar for pandas/sklearn
Python
108
star
3

molxspec

ML models to convert molecules to ESI mass spectra and maybe back again
Jupyter Notebook
8
star
4

simppl

A simple probabilistic programming language
Jupyter Notebook
8
star
5

stardocker

Docker container for a Starcluster launcher that can be easily configured to run docker applications
Python
8
star
6

scimitar

Single Cell Inference of MorphIng Trajectories and their Associated Regulation (SCIMITAR)
Jupyter Notebook
7
star
7

colab_biowrappers

Bio and chem tools wrapped in colabs
Jupyter Notebook
6
star
8

gett

Genotype, expression, and trait toolset
Python
3
star
9

hyperparameter.space

Personal blog
HTML
3
star
10

gexpfoundation_hackathon

Code repository for our submission at BioxML hackathon, team LLM
Jupyter Notebook
3
star
11

genoracle

A simple python module for gene set annotation, enrichment testing, consultation of gene/pathway databases and ontologies.
Python
2
star
12

pyroconductor

A high-level interface to access commonly-used R tools from python using the low-level r2py
Python
2
star
13

drug_sensitivity_RelNets

Drug sensitivity prediction with lots of gene/drug/cell line interaction information.
Python
1
star
14

blk

unicode blocks can plot anything!!
1
star
15

scsuite

single-cell Scalable Unified Inference of Trajectory Ensembles
Python
1
star
16

ashley_scripts

Python
1
star
17

parsegeo

Python utilities to parse data from the gene expression omnibus
1
star
18

til-about-jobs

Discrete hints, thoughs on job searches (focused on academia and biotech field because that's what I know)
1
star
19

llm-for-clinical-variants

Jupyter Notebook
1
star
20

embodi

Framework for large language model "embodiment", e.g. props some "sensors" and "actuators" on the LLM
Python
1
star
21

plsrecord

Lightweight data provenance record keeper
Python
1
star
22

pandio

Access python pandas in an "awk-like" manner in the command line -- inspired by Rio
Python
1
star