yngvem/biosim_template

This repository has been archived on 17/Aug/2023
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Created almost 5 years ago
Updated almost 5 years ago

yngvem/biosim_template

yngvem

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python-project-structure

A tutorial on how to manage a Python project

group-lasso

Group Lasso implementation following the scikit-learn API

INF200-2019

Jupyter Notebook

INF200-2019-Exercises

parallelising-python

A notebook that shows some ways to parallelise Python

Jupyter Notebook

PyDense2

A pythonic wrapper to the PyDenseCRF package.

mask_stats

Summary statistics for comparison of binary masks

ntnu-analysis

scinets

Code used for my masters project about tumour segmentation using deep learning.

CT_reconstruction

A toolbox for 2D CT reconstruction written as part of my undergraduate project at the University of Manchester

MutableTrap

Code I wrote to better understand Python functions and decorators.

tex_tools

bibdec

A decorator used to automatically generate citations from Python code

MEK9250-Elastic-Locking

song-vec

brainsim

EJNMMI-20

PDImaging

A Python toolkit for variational and PDE based image processing

Data-analysis-with-Python

Course material for a course I taught summer 2019

Jupyter Notebook

Intro_til_Python_soekemotor

Mandatory assignment for INF120 at NMBU

medvis

Tools for visualising medical images and segmentation masks

singularity-slurm-demo

Coursework_MEK9250

HDF5-with-python

Jupyter Notebook

cookiecutter-nmbu

INF200-2019-ex06

biot_solver

Learning-Haskell

subclass-register

Add all subclasses of given base class to a dictionary.

fenicsdocs

exjour

zebrafish_manual_track_gui

git-learning-by-doing

visutils

Some-slides

turtle_tools

Utilities to simplify working with turtle.py

cd-dynamic-versioning

zebrafish-bloodflow

Jupyter Notebook

fenics-cookiecutter

A cookiecutter template for a FEniCS based Python project

Jupyter Notebook