lexnederbragt/sequencetools

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Language
Perl
License
The Unlicense
Created about 11 years ago
Updated almost 5 years ago

lexnederbragt/sequencetools

lexnederbragt

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Set of scripts etc. to work with DNA sequence and related files

INF-BIO9120_fall2013_de_novo_assembly

Course material for the de novo assembly part of the INF-BIO9120 course at Univ. of Oslo Fall 2013

denovo-assembly-tutorial

A tutorial for learning de novo assembly

developments-in-next-generation-sequencing

Developments in next generation sequencing: instruments, read lengths, throughput. See

Jupyter Notebook

INF-BIOx121_fall2014_de_novo_assembly

canvasCourseCli

A Python-based command-line tool for retrieving, adding and updating content, pages and files exposed to students and teachers, for a Canvas instance (course)

ten_quick_tips_live_coding

Ten quick tips aimed at those interested in applying Participatory Live Coding in to their own teaching.

github_collab_workshop

Material for a workshop on "Writing and publishing on the web together using Github"

INF-BIOx121

Course material for 2017 edition of the INF-BIOx121 course "High Throughput Sequencing technologies and bioinformatics analysis" at the University of Oslo

190109_UnixShell

Repository for the ResBaz Oslo 2019 workshop "Get (even) smarter with the Unix shell"

swc-instructor-retreat-2015-3PM-UTC

Material for the " Simple online and offline resources for making learning more interactive" session of the Software Carpentry + Data Carpentry Instructor & Helper Retreat November 14, 2015

jupyter_dashboards_workshop

2018-02-08-dashboards

Jupyter Notebook

RepSeq

These files belong to this publication: Nederbragt et al. (2010): Identification and quantification of genomic repeats and sample contamination in assemblies of 454 pyrosequencing reads, *Sequencing*. doi:10.1155/2010/782465