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fast-oopsi
a repository containing everything relevant to our fast non-negative deconvolution workoopsi
up-to-date code for model-based inference of spike trains from calcium imagingsmc-oopsi
code to implement our sequential monte carlo (smc) algorithm to perform optimal optical spike inference (oopsi) for individual neuronsFastApproximateQAP
Fast Approximate Quadratic Assignment for (Brain) Graph Matchingpop-oopsi
this repository stores code, text, simulations, and figs (and maybe more) for our population oopsi filterPyGraphStat
python code for statistical analysis of graph-valued dataMatGraphStat
matlab code for various statistical procedures on large graphsgeneralized-signal-subgraph-classifier
signal-subgraph-classifier
code, data, manuscript, figs for signal-subgraph classifier manuscriptjovo.github.com
homepagesupervised_GMRA
code base for implementing supervised GMRA, including classification and regressioncv
my curriculum vitaespike-sorting
Multichannel Electrophysiological Spike Sorting via Joint Dictionary Learning and Mixture Modelingshuffled-graph-theory
"Shuffled Graph Classification: Theory and Applications in Statistical Connectomics"lifelong-learning
supervenience
voltage_coding
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