• Stars
    star
    2
  • Language
    Jupyter Notebook
  • License
    Apache License 2.0
  • Created about 1 year ago
  • Updated about 1 year ago

Reviews

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Repository Details

PyTorch Geometric Example for using Pathway Commons and cBioPortal

More Repositories

1

snp_plotter

snp.plotter is an R package that creates publishable-quality plots of p-values using single SNP and/or haplotype data.
PostScript
17
star
2

causalpath_cytoscape_app

Java
6
star
3

gsoc_2023_pytorch_pathway_commons

Jupyter Notebook
4
star
4

ihop-reach

A web application to access biological data extracted from biomedical literature.
4
star
5

enhance_nlp_interaction_network_gsoc2020

Jupyter Notebook
3
star
6

docker-nodejs-http-server

NodeJS with HTTP Server
Dockerfile
3
star
7

docker-jupyter-keras-tensorflow-tools

Dockerized version of Jupyter with installed Keras, TensorFlow, etc
Jupyter Notebook
3
star
8

biopaxTutorial

BioPAX Tutorial Material
HTML
3
star
9

sysbiocancer2019

Tutorials for Pathway Commons (https://pathwaycommons.org) network analysis tools. Prepared for the Computational Systems Biology of Cancer course at Institut Curie
R
3
star
10

h5adcat

Python
2
star
11

docker-labelme

LabelMe Docker
ApacheConf
2
star
12

reach-query

R
2
star
13

paxtools_python_tutorial

Web Ontology Language
2
star
14

mim

Molecular Interaction Maps
Java
2
star
15

docker-opencpu

Docker Container with R OpenCPU
R
2
star
16

map_clinicaltrials_to_drugbank

R
2
star
17

graph_neural_network_drug_response

Jupyter Notebook
2
star
18

rcellminerPubchem

R
1
star
19

factoid_scoring

Python
1
star
20

r-presentation-template

HTML
1
star
21

covid19-sbgn

COVID19 Pathways as Systems Biology Graphical Notation (SBGN) Diagrams
JavaScript
1
star
22

shiny_network

Example R Shiny application cytoscape/cyjShiny
R
1
star
23

docker-mediawiki-export-convert

Tools for Mediawiki Export and Conversioni to GitHub Markdown
Python
1
star
24

docker-r-shiny-server

Dockerfile for R Shiny Server
R
1
star
25

sbgnvizShiny

Visualize pathway diagrams that use the Systems Biology Graphical Notation Markup Language SBGN-ML format within R Shiny applications.
JavaScript
1
star