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snp_plotter
snp.plotter is an R package that creates publishable-quality plots of p-values using single SNP and/or haplotype data.causalpath_cytoscape_app
gsoc_2023_pytorch_pathway_commons
ihop-reach
A web application to access biological data extracted from biomedical literature.enhance_nlp_interaction_network_gsoc2020
docker-jupyter-keras-tensorflow-tools
Dockerized version of Jupyter with installed Keras, TensorFlow, etcbiopaxTutorial
BioPAX Tutorial Materialsysbiocancer2019
Tutorials for Pathway Commons (https://pathwaycommons.org) network analysis tools. Prepared for the Computational Systems Biology of Cancer course at Institut Curiepyg_pathway_commons_cbioportal
PyTorch Geometric Example for using Pathway Commons and cBioPortalh5adcat
docker-labelme
LabelMe Dockerreach-query
paxtools_python_tutorial
mim
Molecular Interaction Mapsdocker-opencpu
Docker Container with R OpenCPUmap_clinicaltrials_to_drugbank
graph_neural_network_drug_response
rcellminerPubchem
factoid_scoring
r-presentation-template
covid19-sbgn
COVID19 Pathways as Systems Biology Graphical Notation (SBGN) Diagramsshiny_network
Example R Shiny application cytoscape/cyjShinydocker-mediawiki-export-convert
Tools for Mediawiki Export and Conversioni to GitHub Markdowndocker-r-shiny-server
Dockerfile for R Shiny ServersbgnvizShiny
Visualize pathway diagrams that use the Systems Biology Graphical Notation Markup Language SBGN-ML format within R Shiny applications.Love Open Source and this site? Check out how you can help us