SwissTPH/openmalaria.tools

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2
Language
Python
License
Mozilla Public Li...
Created almost 10 years ago
Updated almost 3 years ago

SwissTPH/openmalaria.tools

SwissTPH

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Tools for SwissTPH/openmalaria

openmalaria

A simulator of malaria epidemiology and control

pyfhirsdc

Python scripts to help with the mapping of L2 layer to L3

repvisforODK

Generic R package to analyse ODK data

OpenCOVID

Source code for OpenCOVID, an individual-based model of SARS-CoV-2 transmission and COVID-19 disease dynamics.

openfn-openhim-mediator

Js mediator to use openfn scripts in openHIM

AnophelesModel

An R package to quantify the impact of vector control interventions according to mosquito species characteristics

timci

Tools for Integrated Management of Childhood Illness

WHO-VA

Maintenance of the WHO 2022 Verbal Autopsy Instrument and Documentation

XLSX-pre-commit-and-post-merge

Pre-commit, pre-merge and post merge python3 scripts to support versioning in Excel

TBRU_serialTB

Population dynamics of Mycobacterium tuberculosis within hosts during treatment.

Jupyter Notebook

VivaxModelR

Simulations and calculations on a compartmental model for Plasmodium Vivax dynamics

r-openMalariaUtilities

Work with OpenMalaria from R

CHWplacement

Mirth-Channels

openhds

Meta repository for openhds components

tricc

Tool for rapid implementation of clinical content (TRICC) for CDSS/XFORM

data-diff

Compare data sets

ZanzibarI3

Malaria transmission model for studying imported, introduced and indigenous cases

Jupyter Notebook

TPP_workflow

A workflow to quantitatively define target product profiles of novel tools against infectious diseases with machine learning and disease transmission models

XLSA

Sensitivity analyis for models implemented in Excel

healthcrowd-ui

Pureser

AP-Health-Effects

Graphical overview of the (causal and likely causal) health effects of air pollution.

openhds-sim

openHDS test data generator

odk_planner

mosquito-movement-spatial-repellent-method

method for secondary analysis of trial data

TBRU_L2Africa

Phylogeography of Lineage 2 in Africa.

COVID_measures_by_canton

Repository for the data sets containing the timings on the COVID measures implemented by canton.

commcare-cases-dhis2-events

Routine ETL for CommCare cases --> DHIS2 events

TBRU_RIFcost

Jupyter Notebook