MedKLIP: Medical Knowledge Enhanced Language-Image Pre-Training in Radiology

Introduction:

The official implementation code for "MedKLIP: Medical Knowledge Enhanced Language-Image Pre-Training in Radiology".

Paper Web

Arxiv Version

Quick Start:

Check checkpoints dir to download our pre-trained model. It can be used for all zero-shot && finetuning tasks

• Zero-Shot Classification:

  We give an example on CXR14 in Sample_Zero-Shot_Classification_CXR14. Modify the path, and test our model by python test.py

• Zero-Shot Grounding:

  We give an example on RSNA_Pneumonia in Sample_Zero-Shot_Grounding_RSNA. Modify the path, and test our model by python test.py

• Finetuning:

  We give segmentation and classification finetune code on SIIM_ACR dataset in Sample_Finetuning_SIIMACR. Modify the path, and finetune our model by python I1_classification/train_res_ft.py or python I2_segementation/train_res_ft.py

Pre-train:

Our pre-train code is given in Train_MedKLIP.

• Check the Train_MedKLIP\data_file dir and download the pre-processed data files.
• Modify the path as you disire, and python PreTrain_MedKLIP\train_MedKLIP.py to pre-train.

Acknowledge

We borrow some pre-process codes from AGXnet

Citation

@article{wu2023medklip,
  title={MedKLIP: Medical Knowledge Enhanced Language-Image Pre-Training},
  author={Wu, Chaoyi and Zhang, Xiaoman and Zhang, Ya and Wang, Yanfeng and Xie, Weidi},
  journal={Proceedings of the IEEE/CVF International Conference on Computer Vision},
  year={2023}
}

Contact

If you have any question, please feel free to contact [email protected].