4ureliek/TEorthology 4ureliek/TEorthology

  • Stars
    star
    14
  • Rank 1,438,076 (Top 29 %)
  • Language
    Perl
  • License
    MIT License
  • Created about 9 years ago
  • Updated about 5 years ago
Twitter logo Share LinkedIn logo Share Facebook logo Share
4ureliek/TEorthology
github

4ureliek

Reviews

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Repository Details

Script to help assessing the evolutionary history of a TE family

More Repositories

1

Parsing-RepeatMasker-Outputs

Few scripts facilitating the extraction of info from Repeat Masker .out files
Perl
75
star
2

TEanalysis

Analysis of TE contribution to features (transcripts or simple features). Includes utils to test enrichment.
Perl
24
star
3

ReannTE

Scripts to help transposable elements consensus sequences curation
Perl
10
star
4

Fasta

Perl scripts dealing with fasta files
Perl
6
star
5

MAF_parsing

Get micro deletion amounts to place rates on a tree, from a .maf file
Perl
4
star
6

Bact_Genomics

Accessory scripts for bacterial comparative genomics
Python
2
star
7

DelGet

Get micro and midsize deletions specific to 2+ closely related species after their split
Perl
2
star
8

4ureliek.github.io

HTML
1
star