Explore @BrainCOGS Open Source projects

BRAIN CoGS (@BrainCOGS)

BrainCOGS

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46
Global Org. Rank 82,757 (Top 27 %)
Registered about 6 years ago
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MATLAB
41.7 %

Python
41.7 %

Jupyter Notebook
8.3 %

PostScript 8.3 %
Location 🇺🇸 United States
Country Total Rank 87,054
Country Ranking

PostScript 124

MATLAB
887

HPC_manifolds

Analysis of hippocampal activity in the towers task

brain_atlas_toolkit

A set of python tools for navigating, viewing and manipulating hierarchical brain atlases

Microscope

Design and documentation for the 2p microscope.

precomputed

Slurm/python scripts for converting light sheet data to precomputed format for Neuroglancer visualization

precomputed_annotations

Make precomputed annotation layers for browsing in Neuroglancer

laserGalvoControl

Matlab-based software to control scanning-laser setups for optogenetic experiments. Written by Lucas Pinto, [email protected]

U19-Data-Viewer

behavioralAnalysis

Contains functions to analyze behavioral and optogenetic inactivation data during the accumulating-towers, visually-guided and memory-guided tasks. Written by Lucas Pinto, [email protected], unless stated otherwise in the function header

lightserv

U19-pipeline-python

The python data pipeline defined with DataJoint for U19 projects

Jupyter Notebook

U19-GUI

widefieldImaging

Contains functions to preprocess and analyze widefield calcium imaging data, written by Lucas Pinto, [email protected]