Discover @pmagwene Open Source projects

Paul Magwene (@pmagwene)

pmagwene

Stars
123
Global Rank 178,781 (Top 7 %)
Followers 31
Following 3
Registered about 13 years ago
Most used languages

Python
40.0 %

TeX
15.0 %

Jupyter Notebook
15.0 %

Vim Script
5.0 %

R
5.0 %

Emacs Lisp
5.0 %

Go
5.0 %

C
5.0 %

HTML
5.0 %
Location 🇺🇸 United States
Country Total Rank 39,468
Country Ranking

TeX
395

Emacs Lisp
1,911

R
2,526

Vim Script
5,925

latex-nihbiosketch

A LaTeX class implementing the new NIH Biographical Sketch Format

cirklon.py

Python utilities for the Sequentix Cirklon sequencer

Bio313

OLD Course repository for Bio 313 -- See Bio 723

intro-scicomp-workshop

Introduction to Scientific Computing Workshop

Bio723

Course repository for Bio 723

latex-templates

LaTeX templates for various types of documents

Duke-BioHaskell-Group

A repository for the Duke BioHaskell Interest Group

github2pandoc

A simple python script to convert GitHub flavored markdown to Pandoc flavored markdown

notesdotpy

A simple command line note taking script written in Python.

beamer-theme-collection

A variety of nice Beamer themes collected from across the web

latex-snippets

biofiles

Go library for dealing with common bioinformatics file types.

latex-for-biologists

Notes about why biologists might want to use LaTeX for preparing scientific documents

dotvim

my .vim folder including .vimrc

emacs.d

My Emacs config files

bug-reports

repository for uploading stuff related to bug reports I file

cheatsheets

Cheat sheets (reference cards) for various programs

ukulele

Ukelele related items

spotz

A library for quantifying microbial colony growth using time series imaging

Jupyter Notebook

biolab

Various code tools for common bioinformatics tasks

yamlfold

a python snippet for `folding' a text file with YAML`documents' into lines

dot2texi

A fork of dot2texi with bug fixes

imgz

Python routines for working with image data, based on scikit-image, scipy, etc.

unscanny

A Python tool for time series imaging using flatbed scanners

emacs-musings

ipython-notebooks

Paul's public ipython notebooks

Jupyter Notebook

microbial-growth-models

Jupyter Notebook

groking-emacs

Notes on my attempts to wrap my head around Emacs

dotpandoc

my .pandoc directory

Data-PLoS-Comp-Bio-2011

Read count data for Magwene et al. 2011, PLoS Comp Bio

cluster-kleiweg

Clustering utilities from Peter Kleiweg's website -- see http://www.let.rug.nl/~kleiweg/clustering/