shinout/SAMReader

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1
Language
JavaScript
License
MIT License
Created about 13 years ago
Updated over 12 years ago

shinout/SAMReader

shinout

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parsing SAM format [Node.js]

browser

browsing urls with cookies, that is, we can scrape with authenticated pages! (Node.js)

jsrel

SQLless RDB written in Pure JavaScript

interval-tree

interval tree in javascript

interval-tree2

interval tree in CoffeeScript, available in any JS runtime

SortedList

sorted list in JavaScript (Node.js)

better-combine-reducers

Better redux combineReducers, initial state injectable.

ArrayStream

ReadableStream of arrays, hashed variables [Node.js]

umecob.js

JS template engine available in both Browser and Node.js supporting asynchronous with JSDeferred.

dna

utility functions to handle DNA/RNA string data (JavaScript, Node.js)

standalone

Creates an isolated thread / process in JavaScript (Node.js and modern browsers).

Junjo.js

Yet Another Way of Flow Control (JavaScript)

FASTAReader

read single/multi FASTA

LineStream

a stream emitting lines (from files, streams) [Node.js]

clipcrop

a tool for detecting structural variations using soft-clipping information

bamreader

an object reading bams (for bioinformatics)

argparser

(simplest) parse arguments, options [Node.js]

termcolor

enable console.color() in Node.js

modifier

JavaScript validator / modifier

bundler-comparison

Difference among bundlers in parsing browser field

ArrayEmitter

[Node.js] EventEmitter emitting array-iteration events

txreader

transcripts reader

xml2jade

master-worker

parallelize processes with process.fork() (Node.js)

u2r

url => request info

bgzf

multiwriter

multi writablestream

cookie_json

get cookies of every sites in JSON format (Chrome Extension)

gitax

from NCBI Gi to taxonomy id

roux

clientside controller

random-tools

random utils in JS

svgen

generate DNA sequence with Structural Variations from fasta format

Struct.js

creates object with various descriptors (immutable, private, validation, required, ...)

zlib-raw-sync

synchronous zlib in Node >= 0.8

jp-population-map

population heatmap of Japan

PriProp

a tiny library for PRIvate PROPerties in JavaScript (runnable in Modern Browser and Node.js)

copy-class

copy class in CoffeeScript

statichoster

tiny library to host static files

kanabun-champ

かなぶんで確実に200点をとる

shinout.github.io

fqreader

smith-waterman

Smith-Waterman algorithm in CoffeeScript

sqd

executing unix commands with multiple processes

babel-register-with-upper-dir

Bug reproduction environment for @babel/register

til

Today I Learned

consolog

avoid "%%" to be "%" in console.log

pairgen

paired end NGS emulator (Node.js)

splay

get spliced sequence with exon data with SV