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PHANOTATE
PHANOTATE: a tool to annotate phage genomes.PHACTS
A simple program to classify the lifestyle of phages.prfect
Software to predict the occurence of programmed ribosomal frameshifting in bacterial, phage, and viral genomescircualign
A tool to align circular genomes on a common featureRepeatFinder
A python package to quickly find repeats in a DNA sequencegenotate
Prokaryotic and phage genome annotation toolaragorn
tRNA and tmRNA findingkmeans
A python implementation of the kmeans algorithm that functions as a drop in for sklearnReadMapper
ReadMapper is a program that maps sequencing reads to a nucleotide backbone, and then creates a publication quality figure.HotKnots
Fast, and best, DNA/RNA folding algorithmbigint
An implementation of a fixed point integer datatype for the C programming language.kmer_counter
A fast method for counting rare kmers in nucleotide sequencesread_genbank
A module to read and parse the features of a genbank fileparann
Source code for a neural network using back propogation, and in parallel using MPIgoodorfs
Code to classify open reading frames into coding and noncodinggoodgenes
A program to predict protein coding genes from potential open-reading framesbestblasthit
A small utility to parse blast output and return only the best hitdeprekate.github.io
testMultivariate-Entropy-Distance
A new non-supervised gene prediction algorithm for bacterial and archaeal genomesrbs-finder
Ribosomal Binding Site Findersmith-waterman
A perl implementation of the Smith-Waterman amino acid alignment algorithmLove Open Source and this site? Check out how you can help us