Pakillo/writing-reproducible-manuscripts

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Created over 3 years ago
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Pakillo/writing-reproducible-manuscripts

Pakillo

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Talk on writing reproducible manuscripts

R-GIS-tutorial

Spatial data in R: using R as a GIS

grateful

Facilitate citation of R packages

template

A template for data analysis projects structured as R packages (or not)

rmdTemplates

Rmarkdown templates for reproducible science

LM-GLM-GLMM-intro

A unified framework for data analysis with GLM/GLMM in R

getting-job-data-science

Collection of advice and resources for getting a job as data scientist

quarto-course-website-template

A template for course websites developed with Quarto and hosted on GitHub

ggplot-intro

Workshop on data visualisation with ggplot2

GISwithR

GIS with R: slides for the unconverted

ReproducibleScience

Short course on reproducible science: what, why, how

Bayes-R-JAGS-intro

An introduction to hierarchical Bayesian modelling with R, JAGS and STAN

CityShadeMapper

Create high resolution shade maps in cities

ANECAtools

Paquete de R con herramientas para facilitar el proceso de acreditación en la ANECA

Rmarkdown_tutorial

Reproducible Research with Rmarkdown: data management, analysis, and reporting all-in-one

biblioformat

Revise and Reformat Plain Text Bibliographies with R

Rpackages_dir

My directory of R packages for data analysis and visualization, Bayesian statistics, mapping, GIS, climate, Species Distribution Modelling, ecology, etc

safeinstall

Run some basic security checks before installing R packages from online repositories

r-leaflet-maps

Slides on making interactive leaflet maps with R

COVID19-Andalucia

Evolución de la enfermedad por coronavirus COVID-19 en Andalucía

Rmarkdown_workshop

rgis

Streamlining GIS operations in R

rSDM

Species Distribution Modelling in R

journals-software-ecology

A directory of journals publishing software papers related to ecology, evolution & environment

rticles-examples

Examples of rendered PDF articles produced from Rmarkdown templates in rticles package

FloraIberica

An R package to get taxonomic and distribution data for the ~6500 vascular plants present in the Iberian Peninsula and Balearic Islands

phyloENM-TREE

Comparing independent, partial pooling, and phylogeny-informed ecological niche models

letter

tweets_ESA2019

Dashboard to explore tweets from Ecological Society of America 2019 Meeting (#ESA2019)

exclosures-Almoraima

Research compendium for "Impactos de la herbivoría por ungulados en las comunidades de plantas leñosas del Parque Natural Los Alcornocales""

model-selection-in-practice

Statistical model selection in practice (or 'Which variables should I keep in my model?'). Slides discussing variable selection, information criteria, etc.

tweets_SIBECOL2019

Dashboard to explore tweets from SIBECOL2019 conference

stats-intro

Introduction to statistical inference

github-workshop

Developing efficient workflows with git & GitHub

lump.split.pool.ENM

Comparing different approaches in ecological niche modelling (lumping, splitting, pooling taxa) through computer simulations

tweets_AEET2021

Dashboard to explore tweets from AEET 2021 conference

R-Asturias-DataViz-Contest

pacotools

Miscellaneous tools I often need and forget about

RmdTools

Tools and functions to work with Rmarkdown

DHARMa.helpers

Helper functions to check Bayesian brms models with DHARMa

Pakillo.r-universe.dev

Pakillo

thermophilization

Analysis of changes in biotic community structure in relation to climate change.

Carex.bipolar

Research compendium for "Niche shifts after long-distance dispersal events in bipolar sedges (Carex, Cyperaceae)"

R-intro

example

This is just an example