Sarder Lab (@SarderLab)
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SarderLab

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  • Stars
    star
    152
  • Global Org. Rank 46,732 (Top 15 %)
  • Registered over 6 years ago
  • Most used languages
    Python
         87.0 %
    MATLAB
         8.7 %
    HTML
         4.3 %
  • Location ๐Ÿ‡บ๐Ÿ‡ธ United States
  • Country Total Rank 38,497
  • Country Ranking
    MATLAB
         3,470
    Python
         6,824

Top repositories

1

H-AI-L

A human in the loop solution to machine learning for pathologists (easy semantic segmentation of WSI)
Python
51
star
2

Histo-cloud

Python
18
star
3

tf-WSI-dataset-utils

An optimized pipeline for working with Whole Slide Image (WSI) data in Tensorflow
Python
15
star
4

extract-xml-region

A code for extracting annotated regions from whole slide images (WSIs) anotated in Aperio Imagescope
Python
11
star
5

WSI-ProGAN

A modified version of ProGAN which trains using whole slide images (WSIs). Patches are extracted from WSIs at training time removing the need for WSI chopping.
Python
9
star
6

WSI-cycleGAN

An version of the popular cycleGAN architecture, optimized for whole slide image (WSI) datasets
Python
7
star
7

DN_classification

Python
5
star
8

WSI-stylegan

Python
4
star
9

SKIE-Automated-neuroendocrine-tumor-grading

Python
4
star
10

Multi-Compartment-Segmentation

Python
3
star
11

HistoLens

MATLAB
3
star
12

tfWavelet

A fully differentiable implimentation of the discreate wavelet transform (DWT) in tensorflow
Python
3
star
13

federated_learning

Federated learning using the Digital Slide Archive and HistomicsTK-deeplab
Python
3
star
14

IFTA_segmentation

2
star
15

PodoCount

A tool for whole-slide podocyte quantification
Python
2
star
16

Summary_Feature_Extraction

Python
2
star
17

Microvascular_invasion

HTML
1
star
18

custom_CNN_using_tensorflow

This is a code which was created by Brendon Lutnick to demonstrate efficient input pipelines and how to create a custom CNN in tensorflow using image data.
Python
1
star
19

PodoSighter

Python
1
star
20

Renal-Feature-Extraction

MATLAB
1
star
21

Object_and_Feature_Extraction

Python
1
star
22

HistomicsTK_PodoSighter

Python
1
star
23

HistomicsTK-PodoCount

Python
1
star
24

Aperio-XML-tools

Code for consuming and creating XML annotations in Aperio Imagescope. Transfers between pixel and contour space
Python
1
star