• Stars
    star
    4
  • Rank 3,287,461 (Top 66 %)
  • Language
    Python
  • License
    Apache License 2.0
  • Created over 9 years ago
  • Updated over 7 years ago

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Repository Details

Uses SAMTools, Python 2.7 and PySam to extract either junctions or exon read counts for known and novel junctions and exons. Requires an indexed BAM file with genomic coordinates