Discover @zhenchengfang Open Source projects

@zhenchengfang

zhenchengfang

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PPR-Meta

A tool for identifying phages and plasmids from metagenomic fragments using deep learning

PlasGUN

Gene prediction in plasmid metagenomic short reads using deep learning.

VirionFinder

VirionFinder: identify complete and partial phage virion proteins from virome data using the logo and biochemical properties of amino acids

metaProbiotics

Mining the probiotics from metagenomic bins primary sequences using the language model

DL-VM

VirionLang

Applying the language model to protein sequences improves the identification of prokaryotic virus virion protein.

PlasTrans

Identify the conjugative and mobilizable plasmid fragments in plasmidome using sequence signatures.