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@xinghuq

xinghuq

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DeepGenomeScan

DeepGenomeScan: A Deep Learning Approach for Whole Genome Scan (WGS) and Genome-wide Association Studies (GWAS)

HierDpart

The repository to store HierDpart

KLFDAPC

KLFDAPC: Kernel local Fisher discriminant analysis of principal components (KLFDAPC) for large genomic data

DNN_ABC

Approximate Bayesian computation with deep learning. A deep neural network inference with an rejection criterion.

DA

DA incorporates the commonly used linear and non-linear, local and global supervised learning approaches (discriminant analysis). These discriminant analyses can be used to do ecological and evolutionary inference. We show the examples of demographic history inference, species identification, and population structure inference in the vignettes using the supervised discriminant analysis.