Gus Dunn (@xguse)
github

xguse

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  • Stars
    star
    101
  • Global Rank 206,374 (Top 8 %)
  • Followers 36
  • Following 50
  • Registered about 15 years ago
  • Most used languages
    Python
         86.7 %
    HTML
         6.7 %
    Shell
         6.7 %
  • Location ๐Ÿ‡บ๐Ÿ‡ธ United States
  • Country Total Rank 43,851
  • Country Ranking
    Python
         9,186

Top repositories

1

blacktie

Blacktie: a streamlined interface to the popular tophat/cufflinks RNA-seq pipeline
Python
26
star
2

table_enforcer

Table Enforcer is my attempt to apply a sort of "test driven development" workflow to data cleaning and validation. A python package to facilitate the iterative process of developing and using schema-like representations of DataFrames in pandas for recoding and validating instances of these data.
Python
17
star
3

cookiecutter-snakemake-analysis-pipeline

A cookiecutter template that reflects my favored structure for setting up Snakemake-based analysis pipelines.
Python
16
star
4

Combinatorics

This set of basic combinatorics functions supplements Python's itertools module.
Python
9
star
5

rSeqPipeline

personal RNAseq analysis pipeline for the lab
Python
8
star
6

scipherPyProj

Collection of bioinformatic python code.
Python
7
star
7

conda-package-repo

This is a site to host my self-built conda packages for cross location installations.
HTML
3
star
8

BiBench

BiBench is a Python library designed to simplify biclustering tasks.
Python
3
star
9

extract-genome-region

Given a CSV file of variable information defining the regions of interest, return a file that contains a fasta-formatted representation of these regions.
Python
2
star
10

snaketools

Python
2
star
11

gatk-best-practices-interpretation

Shell
1
star
12

gusPyProj

Python
1
star
13

spartan

A spartan bioinformatics package, providing only the essentials and nothing fancy or luxurious. Enough to get the job done quickly without flourish.
Python
1
star
14

gProj

A personal project management application based on task inputs/outputs rather than timelines. /*NOT ready for consumption*/
Python
1
star
15

customTAMO

Repo for my changes to the TAMO framework
Python
1
star