Thanh Lee (@thanhleviet)
github

thanhleviet

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Top repositories

1

ISfinder-sequences

Insertion sequences (Insertion Element) [https://en.wikipedia.org/wiki/Insertion_sequence] collected from ISfinder (https://isfinder.biotoul.fr/)
47
star
2

sci-hub

A simple extension for safari web browser to access papers
HTML
21
star
3

shiny-realtime-stock-chart

A prototype of real-time chart for stock trading. Made with shiny and highcharter
R
5
star
4

ansible-slurm-climb

Ansible playbook for installing SLURM based cluster on CLIMB (Cloud Infrastructure for Microbial Bioinformatics)
Python
5
star
5

nf-pipelines

A mix of nextflow scripts mainly used for bacteria. Under developing.
Nextflow
3
star
6

nf-nanopore-assembly

Simple nextflow script to run de-novo assembly on nanopore data with Flye and polishing the assembly with medaka.
Nextflow
3
star
7

nf-pilon

A simple nextflow script to run iteratively pilon for polishing long read contigs with Illumina reads
Python
2
star
8

docker-tensorflow-flask

Docker for implementing tensorflow based models as a webservice using Flask
Python
2
star
9

wave_julia

Continuous Wavelet Transform in Julia based on Torrence and Compo (1998) http://paos.colorado.edu/research/wavelets/
Jupyter Notebook
1
star
10

nextflow-ratt

using RATT with nextflow and docker
1
star
11

tanglegram

Make tanglegram with R
HTML
1
star
12

monitor_github_release

Simple python script for monitoring software of interest for SARS-Covid19 sequencing pipelines at QIB
Python
1
star
13

extract-table-from-docx-with-r

Trích xuất dữ liệu bảng biểu trong file Word (docx) và tạo báo cáo thống kê số liệu bằng R
HTML
1
star
14

make_prokka_db

A script for downloading complete sequences from genbank and make blast database for use with prokka
Python
1
star