Discover @spiros Open Source projects

Spiros Denaxas (@spiros)

spiros

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356
Global Rank 77,490 (Top 3 %)
Followers 116
Following 40
Registered about 16 years ago
Most used languages

Perl
64.0 %

Python
16.0 %

Jupyter Notebook
4.0 %

R
4.0 %

Lua
4.0 %

SCSS 4.0 %

Dockerfile
4.0 %
Location 🇬🇧 United Kingdom
Country Total Rank 4,158
Country Ranking

SCSS 95

Perl
113

Dockerfile
192

R
604

Lua
776

Python
1,138

Jupyter Notebook
4,848

discrete_frechet

Compute the Fréchet distance between two polygonal curves in Euclidean space.

tofu

Tofu is a Python tool for generating synthetic UK Biobank data.

chronological-map-phenotypes

Machine-readable version of electronic health record phenotypes for Kuan V. and Denaxas S. et al.

ukbiobank-resources

A curated list for preprocessing, cleaning, mapping and analyzing UK Biobank data.

phemap

Functions to map between ICD-10 terms and PheCodes for UK Biobank hospital electronic health records

ukb-biomarker-phenotypes

Phenotyping algorithms for common biomarkers in primary care EHR for UK Biobank

hdr-caliber-phenotype-library

HDR UK National Phenotype Library

docker-ukbiobank-utils

Docker image for running UK Biobank utilities: ukbunpack, ukbfetch, ukblink, ukbgene, ukbmd5, ukbconv, and gfetch

atyimo

atyimo: probabilistic record linkage for massive administrative datasets

caliber-multimorbidity-shiny

Source code for interactive R Shiny tools to explore and visualize multimorbidity in national electronic health records

perl-mendeleysqlite

Tools for working directly with the Mendeley client SQLite database.

URI-ParseSearchString

Parse search engine referrer URL's and extract the name, query and domain.

WebService--Mendeley

Perl wrapper around the public Mendeley API : WebService::Mendeley

Medical-OPCS4

A Perl wrapper around the OPCS-4 Classification for medical procedures.

Mocker

Generate fake data using Perl.

HES-lookups

Hospital Episode Statistics (HES) data lookups in CSV format.

terminal.love

emulating a fallout terminal with love2d

WebService--GSISCompanyAFM

Validate or obtain information on a company AFM number via the GSIS portal

WebService-Tagzania-API

Release history of WebService-Tagzania-API

nkua-health-data-science

Pandas teaching materials for NKUA

Jupyter Notebook

Parse-Stata-DtaReader

Release history of Parse-Stata-DtaReader

WebService-ClinicalTrialsdotGov

Perl wrapper around the clinicaltrials.gov API.

WebService-TWFY-API

Release history of WebService-TWFY-API

WebService--FuncNet

Perl API around the FuncNet API for functional analysis of proteins.

Medical-DukePTP

Medical::DukePTP - calculate the Duke pre-test probability of coronary artery disease

Medical-ICD10

Perl module for parsing ICD10 diagnostic codes.

Medical-NHSNumber

Perl module to validate new-style NHS numbers in the UK

Data-DDI

Data::DDI - Manipulate DDI2 documents using Perl.

WebService-Geograph-API

Release history of WebService-Geograph-API