Stephanie Spielman (@sjspielman)
github

sjspielman

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  • Stars
    star
    185
  • Global Rank 130,901 (Top 5 %)
  • Followers 82
  • Following 1
  • Registered over 11 years ago
  • Most used languages
    R
         38.9 %
    Python
         27.8 %
    HTML
         11.1 %
    Shell
         5.6 %
    HyPhy     5.6 %
    CSS
         5.6 %
    TeX
         5.6 %
  • Location 🇺🇸 United States
  • Country Total Rank 30,303
  • Country Ranking
    HyPhy     8
    R
         918
    HTML
         4,209
    TeX
         5,103
    Python
         8,416

Top repositories

1

pyvolve

Python library to simulate evolutionary sequence data
Python
78
star
2

introverse

Documentation for beginners entering R and the tidyverse
R
29
star
3

datascience_for_biologists

Course materials for Rowan University Course "Data Science for Biologists"
HTML
27
star
4

phyphy

Python HyPhy: Facilitating HyPhy execution and parsing
Python
21
star
5

alignfigR

Create sequence alignment figures in R
R
6
star
6

UTbiocomputing2015

Peer-led working group in Biological Computing at UT Austin, Spring 2015
Python
4
star
7

leisr_validation

Code accompanying LEISR manuscript
R
2
star
8

grabbag

Various scripts I have written that seem useful
HTML
2
star
9

dragon

Deep time Redox Analysis of the Geobiology Ontology Network
R
2
star
10

ds4b.materials

Apps and useful student functions for BIOL01301, packaged up
CSS
2
star
11

dnds_1rate_2rate

Repository for manuscript "A comparison of one-rate and two-rate inference frameworks for site-specific dN/dS estimation" by SJS, SW, COW.
HyPhy
2
star
12

alignment_filtering

Code and data for "Limited Utility of Residue Masking for Positive-Selection Inference," by SJS, ETD, COW.
Python
2
star
13

mammalian_gpcr_selection

Repository for Data in "Membrane environment imposes unique selection pressures on transmembrane domains of G-protein coupled receptors"
Python
1
star
14

protein_rates_models

Comparing rates across models
Shell
1
star
15

datascience_final_assignment

COVID shiny app!!!
1
star
16

sam-kasten-memoirs

English translation of the memoirs of Sam Kasten (Kestin), beloved Yiddish theater comedian
1
star
17

mutsel_benchmark

Repository for " Extensively-parameterized mutation–selection models reliably capture site-specific selective constraint" by SJS and COW.
TeX
1
star
18

wmeecv_hsab_analysis

R
1
star
19

evolfoRces

Simulate population genetics simulations for the classroom
R
1
star
20

plot-iris

Shiny app for teaching students about different types of quantitative plots
R
1
star