Sean (@seanrjohnson)
github

seanrjohnson

Twitter logo Share LinkedIn logo Share Facebook logo Share
  • Stars
    star
    124
  • Global Rank 177,673 (Top 7 %)
  • Followers 16
  • Following 7
  • Registered over 7 years ago
  • Most used languages
    Jupyter Notebook
         60.0 %
    C
         20.0 %
    Python
         20.0 %
  • Location πŸ‡ΊπŸ‡Έ United States
  • Country Total Rank 69,372
  • Country Ranking
    Jupyter Notebook
         2,059

Top repositories

1

protein_scoring

Generating and scoring novel enzyme sequences with a variety of models and metrics
Jupyter Notebook
60
star
2

protein_gibbs_sampler

Gibbs sampling for generating protein sequences
Python
46
star
3

esmologs

Local homology search powered by ESM-2 language model, foldseek, hhsuite, and hmmer.
Jupyter Notebook
12
star
4

hmmer3di

hmmer3 and easel patched to support the 3di alphabet.
C
6
star
5

proteinotes

Jupyter Notebook
1
star