1

xs

A FASTQ read simulator

C

8

2

goose

A toolkit for DNA sequence analysis

C

7

3

ANT

Analysis of DNA sequences using algorithmic entropy (Kolmogorov complexity)

Shell

3

4

owl

A tool to order FASTQ reads using elastic cluster mapping

C

2

5

kestrel

A fast and flexible FASTQ read filter for ancient DNA

C

2

6

eleanora

Ultra-fast mapping and visualization of similar genomic regions

C

2

7

highfcm

A genomic compression algorithm that relies on a pre-analysis of the data (algorithmic entropy filter) before compression

C

1

8

hawk

Hawk: a study tool for efficient compression of FASTQ files

C

1

9

rebico

Review of biological data compression tools: download, install and run

Shell

1

10

DNAC

A DNA sequence corpus for compression benchmark

Shell

1

11

geco3

Efficient compression of genomic sequences

C

1

12

STMM

Substitutional Tolerant Markov Models for relative compression of genomic sequences

Shell

1