Discover @phi-max Open Source projects

Philip Kollmannsberger (@phi-max)

phi-max

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skeleton3d-matlab

MATLAB code to calculate the 3D skeleton of a binary volume using parallel medial axis thinning

skel2graph3d-matlab

MATLAB code to derive the network graph of a 3D voxel skeleton

OCY_connectomics

This is the MATLAB code used to produce all data plots in the paper "The small world of osteocytes: connectomics of the osteocyte lacuno-canalicular network" (New J. Phys. 19 073019, https://doi.org/10.1088/1367-2630/aa764b) from the raw confocal image data.