Shujun Ou (@oushujun)
github

oushujun

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  • Stars
    star
    617
  • Global Rank 48,086 (Top 2 %)
  • Followers 156
  • Following 7
  • Registered about 11 years ago
  • Most used languages
    Perl
         66.7 %
    Jupyter Notebook
         11.1 %
    C
         11.1 %
    Shell
         11.1 %
  • Location πŸ‡ΊπŸ‡Έ United States
  • Country Total Rank 14,751
  • Country Ranking
    Perl
         40

Top repositories

1

EDTA

Extensive de-novo TE Annotator
Perl
343
star
2

LTR_retriever

LTR_retriever is a highly accurate and sensitive program for identification of LTR retrotransposons; The LTR Assembly Index (LAI) is also included in this package.
Perl
190
star
3

LTR_FINDER_parallel

A parallel wrapper for LTR_FINDER
Perl
49
star
4

MTEC

A repo contains historical and updated MTEC libraries.
Perl
15
star
5

ThetaPi

Nucleotide diversity estimation using population SNP data
Perl
6
star
6

PopTEvo

Study of TE evolution in a population of genomes
C
4
star
7

Maize_NC358

The repository for codes developed to generated the Maize NC358 assemblies and analyses.
Jupyter Notebook
3
star
8

TAIR12-TE

A repository to host scripts for annotating TEs in the Arabidopsis TAIR12 (Col-CC) genome
Shell
2
star
9

Maize_TE_Protocol

A repository to host scripts created for maize TE annotation protocols
Perl
2
star
10

riceTElib

A collection of manually curated TE examplars in rice (Oryza sativa).
2
star