Alexey Strokach (@ostrokach)
github

ostrokach

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Top repositories

1

proteinsolver

Graph neural network for generating novel amino acid sequences that fold into proteins with predetermined topologies.
Jupyter Notebook
52
star
2

csc343-ta-notes

Interactive tutorial notebooks for CSC343 - Introduction to Databases.
Jupyter Notebook
16
star
3

conda-recipes-extra

Shell
5
star
4

uniparc_xml_parser

UniParc dataset describing ~300 million protein sequences converted into relational tables accessible through Google BigQuery (and as Parquet files).
Rust
2
star
5

MMTK

Python
2
star
6

protein-adjacency-net

Classifier trained to predict whether a protein sequence matches an adjacency network and a GAN trained to fool the classifier.
Jupyter Notebook
1
star
7

protein_folding_energy

Scripts for making a "protein folding energy" dataset.
Jupyter Notebook
1
star
8

biskit

Python
1
star
9

cinfony

Automatically exported from code.google.com/p/cinfony
Python
1
star
10

pdb2pka

C++
1
star
11

drug-combinations-az

Predicting synergistic drug combinations in the AstraZeneca-Sanger drug combination prediction DREAM challenge.
Jupyter Notebook
1
star
12

drug-combinations

Predicting synergistic drug combinations.
Python
1
star