G4Catchall

G4Catchall is a python package designed to scan given DNA/RNA sequences for G-quadruplexes with or without atypical features

Fast-NW-and-SW-Pairwise-alignment-using-numba-JIT

This project includes Needleman-Wunsch and Smith-Waterman algorithms and their afine gap variations (Gotoh) written to work with Cython, PyPy and Numba. Numba JIT shows greater performance. For Best performance use gotoh_jit.py to get only the best score and use gotoh_jit_traceback to get the best alignment

jasco_jws_reader

This project aims to read jws files obtained from jasco spectrometers.