Nathan S. Watson-Haigh (@nathanhaigh)
github

nathanhaigh

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  • Stars
    star
    120
  • Global Rank 180,938 (Top 7 %)
  • Followers 82
  • Following 48
  • Registered about 12 years ago
  • Most used languages
    Shell
         40.0 %
    Python
         30.0 %
    TeX
         20.0 %
    C++
         10.0 %
  • Location 🇦🇺 Australia
  • Country Total Rank 3,195
  • Country Ranking
    TeX
         44
    Shell
         215
    C++
         574
    Python
         1,700

Top repositories

1

parallel-rsync

Parallelised rsync - using GNU parallel
Shell
39
star
2

amos

A clone of the official AMOS git repo on sourceforge: https://sourceforge.net/projects/amos/
C++
17
star
3

ngs-handout

This project is in the process of being ported over to another repository.
TeX
16
star
4

2019_EMBL-ABR_Snakemake_webinar

Scripts and Snakemake pipeline used in the EMBL-ABR webinar
13
star
5

snakemake-tutorial

Python
11
star
6

embl-abr-snakemake-nextflow-workshop

Hands-on workshop for Snakemake and Nextflow
TeX
6
star
7

nathan_sysadmin_scripts

A collection of various sysadmin-related scripts which others might find useful.
Shell
4
star
8

safpis

safpis is a Python library to access the South Australia Fuel Pricing Information Scheme (SAFPIS) REST API
Python
3
star
9

nectar-workshop-template

Files used for instantiating multiple VMs on the Australian NeCTAR Reseach Cloud for the purpose of running hands-on training workshops. It is also possible to generate NX Session files making the NX client setup fast and painless.
Shell
3
star
10

snakemake_template

A small template to ease setting up new Snakemake workflows capable of submitting jobs to a Slurm cluster such as phoenix.
Python
2
star
11

docker-seqtools

Dockerfile for SeqTools (Blixem, Dotter, Belvu) from the Sanger
1
star
12

ronin_snakemake_demo

Demonstration Snakemake workflow for Ronin/AWS Slurm-based auto-scaling cluster
Shell
1
star