Discover @minillinim Open Source projects

Michael Imelfort (@minillinim)

minillinim

Stars
124
Global Rank 174,020 (Top 7 %)
Followers 39
Registered over 13 years ago
Most used languages

Python
42.1 %

Perl
31.6 %

Shell
10.5 %

JavaScript
5.3 %

C
5.3 %

C++
5.3 %
Location 🇦🇺 Australia
Country Total Rank 2,942
Country Ranking

Perl
64

Python
484

Shell
1,079

C++
1,837

C
2,210

JavaScript
8,150

ellipsoid

Example code for enclosing points in an elipsoid

stackedBarGraph

stackedBarGraph

SimpleHMMER

Super simple wrapper for running hmmer3 and parsing the output

templates

A set of templates which make coding more funner!

GroopM

Place holder for the old GroopM site

mikezbioscripts

A collection of scripts that I used to use. Abandoned now, use them at your own peril...

SaSSY

Short read assembler for illumina-type DNA sequence data

gff2fasta

convert a gff file into fasta format

BamTyper

Working with paired reads in BAM format

BamM

Do things with BAM/BWA

ionPairer

create a rough scaffold using ion torrent MP reads

explodeGenbank

Separate a multiple genbank file into separate records

BusMemeGenerator

Code for the QCA / transport action group bus route meme project

ParseM

drupal_sync

sync a dev and production drupal installation

mikePlotLib

sam2fpkg

Convert a sam mapping file and gff3 annotation file to find transcriptomic level in microbial transciptomic data sets

GroopM_test_data

Data used for validating GroopM

APP

Ace Pyrotag Pipeline - wrapper for QIIME and R - interfaces with PyroDB

ScreamingBackpack

ScreamingBackpack