Mikhail Kolmogorov (@mikolmogorov)
github

mikolmogorov

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  • Stars
    star
    944
  • Global Rank 32,237 (Top 2 %)
  • Followers 205
  • Following 7
  • Registered almost 12 years ago
  • Most used languages
    Python
         58.3 %
    C++
         25.0 %
    C
         8.3 %
    WDL     8.3 %
  • Location πŸ‡ΊπŸ‡Έ United States
  • Country Total Rank 9,407
  • Country Ranking
    WDL     28
    C
         478
    C++
         4,313
    Python
         5,508

Top repositories

1

Flye

De novo assembler for single molecule sequencing reads using repeat graphs
C
758
star
2

Ragout

Chromosome-level scaffolding using multiple references
Python
143
star
3

maf2synteny

A tool for recovering synteny blocks from multiple alignment
C++
28
star
4

hapdup

Pipeline to convert a haploid assembly into diploid
Python
28
star
5

pbclip

A simple tool to fix PacBio fasta/q that was not properly split into subreads
C++
14
star
6

jax-meta-tutorial

Metagenome assembly tutorial, JAX long-read sequencing workshop 2022
Python
8
star
7

Nano-Align

Angorithms for protein identification using a sub-nanopore
Python
6
star
8

dipdiff

SV calling for diploid assemblies
Python
5
star
9

card_workflows

WDL workflows for the NIH CARD long-read sequencing project
WDL
2
star
10

ig-corrector

A tool for immunoglobulines NGS data processing
Python
2
star
11

trapezoid_map

Useless implementation of trapezoidal map search structure
C++
2
star
12

debrujin

Useless debrujin graph implementation
Python
1
star