Jemma Stachelek (@jsta)
github

jsta

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Top repositories

1

r-docker-tutorial

A docker tutorial for reproducible research
R
250
star
2

nhdR

R interface to the National Hydrography Dataset πŸ’§
R
33
star
3

limnology_models_data

Models and datasets for Limnology
21
star
4

ipdw

Interpolation by Inverse Path Distance Weighting 🌊
R
11
star
5

sfpolymorph

Calculate polygon shape metrics
R
10
star
6

wql

Water Quality - Lite : Exploring Water Quality Monitoring Data
R
9
star
7

wikilake

Scrape lake metadata tables from Wikipedia 🏞
R
8
star
8

gshhg

A Global Self-consistent, Hierarchical, High-resolution Geography Database
R
7
star
9

gssurgo

Python package enabling an open source gSSURGO workflow
Python
7
star
10

looseleaf

Research compendium template for tracking, linking, and sharing data explorations
R
6
star
11

streamnet

Morphology analysis of stream networks πŸƒ
R
6
star
12

dams

R interface to the United States National Inventory of Dams
R
6
star
13

externalrdata

Template for R packages that fetch, cache, and serve data from external sources
R
5
star
14

cond2sal_shiny

Shiny app to convert conductivity to salinity
R
4
star
15

openbugs

Source code mirror for openbugs
Roff
4
star
16

nesRdata

R package to fetch, cache, and serve the National Eutrophication Survey
R
3
star
17

nlaR

R interface to the National Lakes Assessment
HTML
3
star
18

nsws

National Surface Water Survey Package
R
3
star
19

nml

An R package for parsing Fortran namelist files 🎩
R
3
star
20

zoteroscripts

Recipes for managing your Zotero library with `pyzotero`
Python
3
star
21

natcap-invest-docker

Docker wrapper around NatCap's InVEST
Python
3
star
22

sparrow_1992-phosphorus

SPAtially Referenced Regression on Watershed attributes
R
3
star
23

glwdr

R client for the Global Lakes and Wetlands Database
R
3
star
24

jsta

An automated build system for generating a release and blog list for Github profiles
Python
3
star
25

nlmpy

A Python package to create neutral landscape models [pip mirror]
Python
3
star
26

rv

Simulation-Based Random Variable Objects
R
2
star
27

DataflowR

Data handling and interpolation for underway water quality monitoring
R
2
star
28

limnojobs

Twitter feed of newly posted jobs in limnology
Python
2
star
29

wasp

Water Quality Analysis Simulation Program
Fortran
2
star
30

imagemagick_cheatsheet

Cheatsheet for the command line image editing program Imagemagick
TeX
2
star
31

BAYEX

Spatiotemporal Bayesian hierarchical modeling of extremes with max-stable processes
Python
2
star
32

science_cheatsheet

What is Science?
Makefile
2
star
33

mapview.addin

RStudio addin for viewing Spatial objects
R
2
star
34

glatos

Mirror of the glatos R package
HTML
2
star
35

pyffp

A simple two-dimensional parameterisation for Flux Footprint Prediction (FFP)
Python
2
star
36

rinvest

R wrapper for Python invest
R
2
star
37

glatos-spatial_workshop_materials

GLATOS - Working with Geospatial Data
CSS
1
star
38

wayback

R interface to the WayBack Machine API πŸ•πŸ”™
R
1
star
39

aslo_tweets

analyzing tweets about ASLO 2018
1
star
40

paper_template

Minimal Makefile-driven paper template
Makefile
1
star
41

autodatadoc

Example of automated data documentation for R packages
R
1
star
42

NEON-python-Spatial-Vector

Jupyter Notebook
1
star
43

MANAGE

Measured Annual Nutrient loads from AGricultural Environments
R
1
star
44

learnglm

Resources to learn the General Lake Model
R
1
star
45

gh_cran_portfolio

Github CRAN Portfolio Dashboard
CSS
1
star
46

dciR

Calculate Directional Connectivity Index without Matlab
MATLAB
1
star
47

clark2007

Code examples from Models for Ecological Data
CSS
1
star
48

gnis

USGS Geographic Names Information System (GNIS)
R
1
star
49

realsat-r

Reservoir and Lake Surface Area Timeseries-Reservoirs
R
1
star
50

pysparrow

Forked from: code.google.com/p/pysparrow
Python
1
star
51

neon_lakes

Source for NEON lakes blog post
R
1
star
52

icesat

ATLAS/ICESat-2 L3A Inland Water Surface Height
Python
1
star
53

nesR

Scrape Data from the National Eutrophication Survey
R
1
star
54

schemeR

Visualize SQLite structure with R :neckbeard:
R
1
star
55

irlgraph

Irregular Landscape Graphs to generate accumulated cost surfaces
R
1
star
56

GLM_docker

Building the General Lake Model (GLM) with Docker
Dockerfile
1
star
57

nes_connectivity_p

Does Freshwater Connectivity Influence Phosphorus Retention in Lakes?
R
1
star
58

AQUASIM

Computer Program for the Identification and Simulation of Aquatic Systems
C++
1
star
59

HydroPy

Unofficial mirror of the HydroPy global hydrological model from Zenodo
Python
1
star
60

SADIE

Spatial Analysis by Distance IndicEs
Fortran
1
star
61

makefile-recipes

Examples of Makefile driven pipelines for computational research
1
star
62

swatr

A multi-OS implementation of the TAMU SWAT model
Fortran
1
star
63

dissertation

Spatial Patterning of Lake Nutrients and Morphometry at Macroscales: Importance of Regional Factors and Aquatic-Terrestrial Linkages
TeX
1
star
64

ProgrammingNotes

Notes and Cheatsheets on Programming Languages and Web Dev Frameworks
HTML
1
star
65

glmgui

GUI for working with the GLM lake model.
R
1
star