ComplexHeatmap
Make Complex Heatmapscirclize
Circular visualization in REnrichedHeatmap
make enriched heatmap which visualizes the enrichment of genomic signals to specific target regions.spiralize
Visualize data on spiralsInteractiveComplexHeatmap
Make Interactive Complex HeatmapssimplifyEnrichment
Simplify functional enrichment resultsrGREAT
GREAT Analysis - Functional Enrichment on Genomic Regionscola
A General Framework for Consensus Partitioningpkgndep
Analyzing Dependency Heaviness of R PackagesHilbertCurve
Visualize genomic data by Hilbert curvegtrellis
Genomic plot in trellis layoutcirclize_book
Documentation for circlize packageKeywordsEnrichment
bsub
Send R code/R scripts/shell commands to LSF cluster without leaving RComplexHeatmap-reference
Documentation of ComplexHeatmap packageGetoptLong
Parse command-line arguments and simple variable interpolationComplexHeatmap_v2_paper_code
GSEAtraining
circlize_examples
circlize examplesBioMartGOGeneSets
Gene Ontology Gene Sets from BioMartComplexHeatmap-examples
BioCartaImage
BioCarta pathway imagesjokergoo
ngspipeline
NGS pipelineIlluminaHumanMethylationEPICv2anno.20a1.hg38
Crypt-DNASequence
Encrypt and decrypt strings to DNA SequencesUseful_R_packages
GlobalOptions
Generate function to get or set global optionssimona
Semantic Similarity in Bio-OntologiesIlluminaHumanMethylationEPICv2manifest
cola_hcp
Hierarchical Consensus Partitioningjokergoo.github.io
Personal websitespiralize_vignettes
Vignettes of the spiralize packagepheatmap2
pretty and parallel heatmapGeneSummary
RefSeq gene summaryBioMartGOGeneSets_data
cotools
NGS tools for Conputational Oncology group in DKFZcola_manuscript
Scripts for the cola manuscriptUniProtKeywords
Keywords from the UniProt databasesupplementary
simplifyEnrichment_supplementary
Supplementary for simplifyEnrichment manuscriptcola_examples
Examples of cola analysisCePa
Centrality-based pathway enrichmentcolorRamp2
Generate Color Mapping Functionscola_vignettes
Vignettes of the cola packagegsubeval
Substitute with an Evaluated ExpressionGTF
Simple class to process GTF datatop2pct_scientists
top2pct_scientistsepik
Integrative analysis for epigenomic sequencing datasimona_supplementary
List-Vectorize
vectorized functions in perlStatistics-Multtest
Control false discovery rate in multiple testMicroarray-GEO-SOFT
Reading microarray data in SOFT format from GEO databaseLove Open Source and this site? Check out how you can help us