Johan Dahlberg (@johandahlberg)
github

johandahlberg

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  • Stars
    star
    142
  • Global Rank 160,251 (Top 6 %)
  • Followers 65
  • Following 58
  • Registered over 12 years ago
  • Most used languages
    Scala
         53.8 %
    Python
         23.1 %
    Shell
         15.4 %
    Puppet
         7.7 %
  • Location 🇸🇪 Sweden
  • Country Total Rank 1,542
  • Country Ranking
    Puppet
         16
    Scala
         35
    Shell
         760
    Python
         1,223

Top repositories

1

awesome-10x-genomics

List of tools and resources related to the 10x Genomics GEMCode/Chromium system
85
star
2

piper

A genomics pipeline build on top of the GATK Queue framework. Main repository: https://github.com/NationalGenomicsInfrastructure/piper (make sure you fork from there)
Scala
21
star
3

ansible_spark_openstack

Instructions and Ansible playbooks for deploying a Spark stand-alone cluster on OpenStack
Python
7
star
4

polymerase

Data -> DNA -> Data
Scala
4
star
5

Splitter

Scala program for splitting files of some common bioinformatics formats (right now fastq.gz and bam)
Scala
3
star
6

contAdamination

Hacking away on bloom filters and adam...
Scala
3
star
7

vagrant-puppet-slurm

A playground for testing setting up a slurm cluster (for testing purposes only).
Puppet
3
star
8

curiouscrows

Team repository for the Curious Crows for Hack4Sweden 2016
Python
3
star
9

Scripts

My collection of (mostly) bioinformatics related scripts
Shell
2
star
10

BestPracticeSlides

Repo for the code used in the MolMed TechTalk about best practices in scientific computing.
Scala
2
star
11

reedsolomon-scala

Reed-Solomon Encoding in Scala
Scala
2
star
12

PiperWorkshop

Scala
1
star
13

SnpSeqPipeline

Variant calling pipeline for the SNP&SEQ Technology Platform at Uppsala University
Shell
1
star
14

arteria-incubation

Work-in-progress for the upcoming new and improved Arteria packs.
Python
1
star