Paul J. McMurdie (@joey711)
github

joey711

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  • Stars
    star
    703
  • Global Rank 42,712 (Top 2 %)
  • Followers 432
  • Following 6
  • Registered over 13 years ago
  • Most used languages
    R
         81.8 %
    HTML
         18.2 %
  • Location πŸ‡ΊπŸ‡Έ United States
  • Country Total Rank 12,078
  • Country Ranking
    R
         76
    HTML
         2,573

Top repositories

1

phyloseq

phyloseq is a set of classes, wrappers, and tools (in R) to make it easier to import, store, and analyze phylogenetic sequencing data; and to reproducibly share that data and analysis with others. See the phyloseq front page:
R
576
star
2

shiny-phyloseq

An interactive web application for demonstrating and using phyloseq.
HTML
58
star
3

biom

Development version of the biom package for R
R
24
star
4

testpkg

A dummy R package for testing aspects of R development
R
8
star
5

biomformat

Biom file format support in R/Bioconductor, vers. 1.x (JSON) and 2.x (HDF5) https://bioconductor.org/packages/release/bioc/html/biomformat.html
R
7
star
6

phyloseq-demo

Extended demonstrations of the phyloseq package
R
6
star
7

waste-not-supplemental

Supplemental Materials for the "Waste Not, Want Not..." Article in PLoS Computational Biology
3
star
8

dada2docker

Docker build instructions for DADA2 and related functionality
R
3
star
9

phyloseq-extensions

Extensions for the phyloseq package for R
2
star
10

animate.phyloseq

Animation addon tool for phyloseq package
R
2
star
11

joey711.github.com

Official GitHub central page for joey711
1
star
12

biomformat-oldfork

This is deprecated. Please post issues at the BioC-synced joey711/biomformat
R
1
star
13

phyloseq-article-2013

The complete source for reproducing our 2013 PLoS ONE article describing the phyloseq package
HTML
1
star
14

biomformat0

Support for the biom file format in R/Bioconductor, versions 1.x (JSON) as well as 2.x (HDF5)
R
1
star