Jakob Nikolas Kather (@jnkather)
github

jnkather

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  • Stars
    star
    232
  • Global Rank 109,332 (Top 4 %)
  • Followers 103
  • Following 1
  • Registered over 10 years ago
  • Most used languages
    MATLAB
         83.3 %
    JavaScript
         8.3 %
    C++
         8.3 %
  • Location 🇩🇪 Germany
  • Country Total Rank 5,816
  • Country Ranking
    MATLAB
         7
    C++
         7,805

Top repositories

1

MSIfromHE

predict microsatellite status from hematoxylin-eosin histology of gastrointestinal cancer
MATLAB
98
star
2

DeepHistology

A pan-cancer platform for mutation prediction from routine histology
MATLAB
67
star
3

ColorDeconvolutionMatlab

A Matlab implementation of Ruifrok's color deconvolution algorithm.
MATLAB
20
star
4

deep-stroma-histology

Convolutional neural networks for extracting a "deep stroma score" from histological images of human cancer
MATLAB
17
star
5

histology-multiclass-texture

Texture analysis in colorectal cancer histology
MATLAB
8
star
6

histopathology-snippets

Code snippets for histopathology.
4
star
7

immuno_literature

Cancer immunotherapy literature analysis (PubMed papers and registered clinical trials)
MATLAB
4
star
8

immunoABM

an agent-based model of tumor cell - immune cell interactions
MATLAB
3
star
9

histoGAN

Generative adversarial networks for histology images
MATLAB
3
star
10

new-colors-histology

Source codes for: "New colors for histology: optimized bivariate color maps increase perceptual contrast in histological images"
MATLAB
2
star
11

immuneTopography

Analyze topography of tumor-infiltrating immune cells in histological images (QuPath/Matlab)
MATLAB
2
star
12

new-colors-histology-website

This is the website for our project on bivariate colormaps in histopathology
JavaScript
1
star
13

immunoABM3D

3D agent-based model of human colorectal cancer
C++
1
star