Alex Rubinsteyn (@iskandr)
github

iskandr

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Top repositories

1

fancyimpute

Multivariate imputation and matrix completion algorithms implemented in Python
Python
1,242
star
2

parakeet

Runtime compiler for numerical Python
Python
233
star
3

ocaml_llvm

Toy compiler for OCaml Meetup
OCaml
67
star
4

moving_pictures

Create a movie from a sequence of images in Python (uses PIL and ffmpeg)
Python
42
star
5

knnimpute

Python implementations of kNN imputation
Python
31
star
6

striate

Convolutional Neural Networks in Python
C++
28
star
7

shiver

A multi-threaded work queue for LLVM functions
Python
14
star
8

dsltools

Helpers for DSL construction in Python
Python
13
star
9

texture_synthesis

Repetitive pretty pictures on demand
MATLAB
11
star
10

genepool

Framework for writing evolutionary optimization algorithms in OCaml
OCaml
11
star
11

parakeet-retired

Parallelizing Runtime for Array Languages
OCaml
9
star
12

arma

Estimating ARMA model parameters using stochastic gradient descent
Python
6
star
13

adversarial-impute

Possibly ill-fated experimented with Generative Adversarial Imputation
Python
5
star
14

immuno

Predicting immunogenicity of short peptides
Python
4
star
15

censored_regression

Linear regression with lower-bound labels
Python
4
star
16

deep-learning-for-bio

Deep Learning for Biology
4
star
17

attention-in-neural-networks

Code for Miami ML meetup on Attention in Neural Networks
Jupyter Notebook
3
star
18

mhcpred

MHC Binding Prediction
Python
3
star
19

brainmets

Survival prediction for brain metastases
Python
3
star
20

bytestar

Analyze Python bytecode using an SSA control flow graph representation
Python
3
star
21

ml-experiments

Experiments with Jax, PyTorch and variable length sequence models
Jupyter Notebook
3
star
22

nnseq

Multi-sequence learning using recurrent neural networks
2
star
23

simple-somatic-variant-calling

A simple genomics "pipeline" implemented via shell scripts
Shell
2
star
24

data-experiments

Python
2
star
25

immunesearch

Search for peptide substrings in IEDB T-cell assay data
Python
1
star
26

interval

Conversion between genomic interval/coordinate systems
Python
1
star
27

vec

Simple vector expression language implemented in Python
1
star
28

image-experiments

Jupyter Notebook
1
star
29

prototype-pan-allele-class2

Prototype of a pan-allele Class II MHC binding predictor
Jupyter Notebook
1
star
30

msmhc

Looking for "dark matter" of the MHC ligandome in mass specta
Python
1
star
31

yoclo

You Only Command Line Once
Python
1
star