Ino de Bruijn (@inodb)
github

inodb

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  • Stars
    star
    123
  • Global Rank 177,788 (Top 7 %)
  • Followers 126
  • Following 87
  • Registered over 12 years ago
  • Most used languages
    Python
         69.2 %
    Shell
         15.4 %
    TeX
         7.7 %
    JavaScript
         7.7 %
  • Location 🇺🇸 United States
  • Country Total Rank 38,905
  • Country Ranking
    TeX
         4,890
    Shell
         7,142
    Python
         8,416

Top repositories

1

snakemake-workflows

An experimental repo for common snakemake rules and workflows
Python
46
star
2

2014-5-metagenomics-workshop

Metagenomics Workshop 2014-5-21 to 2014-5-23 at SciLifeLab, Stockholm
Python
18
star
3

snakemake-parallel-bwa

A Snakefile to parallelize bwa.
Python
13
star
4

gnu-make-job-scheduler

A library for GNU make to schedule rules as jobs with qsub or sbatch
Shell
11
star
5

sufam

Super sensitive mutation validator, uses sam/bam and vcf
Python
7
star
6

metassemble

Scripts to run several metagenomics assembly programs
Python
7
star
7

dicom-flask-uploader

DICOM Image upload website using Flask
Python
6
star
8

spoetify

Turns a poem into Spotify tracks. Built with python and Flask.
Python
5
star
9

biorhino-tools

A collection of simple bioinformatic scripts
Python
3
star
10

cbioportal-frontend-test

cBioPortal Frontend React Refactor
JavaScript
1
star
11

msc-thesis

TeX
1
star
12

snakemake-uppmax-demo

Demonstrates the use of snakemake compared to GNU make on Uppmax with a simple example
Shell
1
star
13

masmvali

MASMVALI (Metagenomic ASseMbly VALIdation) is an assembly validator for metagenomics with known reference genomes.
Python
1
star