Helena (@hreypar)
github

hreypar

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  • Stars
    star
    6
  • Global Rank 1,300,168 (Top 45 %)
  • Followers 25
  • Following 86
  • Registered about 7 years ago
  • Most used languages
    R
         33.3 %
    Makefile     16.7 %
    Shell
         16.7 %
    HTML
         16.7 %
    Python
         16.7 %
  • Location ๐Ÿ‡ฒ๐Ÿ‡ฝ Mexico
  • Country Total Rank 7,883
  • Country Ranking
    Makefile     52
    R
         114
    Shell
         372
    HTML
         1,561
    Python
         2,300

Top repositories

1

hicproraw-to-bedpe

Import HiC-Pro raw matrix of any resolution into R and generate a hicexp object
R
2
star
2

mk-hicpro-validpairs

Run the HiC-Pro pipeline alignment, filtering and QC steps to obtain validPairs files for each pair of FASTQ files
Python
1
star
3

mk-hicpro-contact-maps

Place al the `validPairs` files corresponding to a replicate under the same directory and build a contact map per sample using HiC-Pro
Makefile
1
star
4

containers_test

Test running rules in a container
HTML
1
star
5

felicidades

Repositorio para darle un pastel de cumpleaรฑos a tus amix
R
1
star
6

export-hicproraw

This module finds the output HiC-Pro raw matrices (bed and matrix files) and creates a directory structure to be consumed by hicproraw-to-bedpe.
Shell
1
star