Discover @flo-compbio Open Source projects

Florian Wagner (@flo-compbio)

flo-compbio

Stars
134
Global Rank 167,484 (Top 6 %)
Followers 39
Following 11
Registered over 11 years ago
Most used languages

Python
50.0 %

Jupyter Notebook
41.7 %

HTML
8.3 %
Location 🇺🇸 United States
Country Total Rank 36,650
Country Ranking

Jupyter Notebook
4,404

HTML
6,151

Python
9,482

monet

Monet: An open-source Python package for analyzing scRNA-Seq data using PCA-based latent spaces

pyaffy

pyAffy: Processing raw data from Affymetrix expression microarrays in Python.

gopca

GO-PCA: An Unsupervised Method to Explore Gene Expression Data Using Prior Knowledge

xlmhg

XL-mHG: A Semiparametric Test for Enrichment in Ranked Lists.

genometools

GenomeTools: Scripts and Classes for Working with Genomic Data

singlecell

SingleCell: A Python/Cython Package for Processing Single-Cell RNA-Seq Data.

2016-python-gene-expression-workshop

Data and Jupyter notebooks for the workshop "Gene Expression Analysis in Python" (2016)

Jupyter Notebook

monet-tutorials

Tutorials on how to use Monet for analyzing single-cell RNA-Seq data

Jupyter Notebook

moana-tutorials

Tutorials for how to use Moana in the form of Jupyter notebooks

Jupyter Notebook

galapagos-examples

Galapagos scRNA-Seq clustering examples

Jupyter Notebook

gopca-demos

GO-PCA demo notebooks

Jupyter Notebook

goparser

GOparser: A Python Framework For Working With Gene Ontology (GO) Terms and Annotations