Discover @emdann Open Source projects

Emma Dann (@emdann)

emdann

Stars
112
Global Rank 191,524 (Top 7 %)
Followers 60
Following 1
Registered about 7 years ago
Most used languages

Jupyter Notebook
45.5 %

Python
27.3 %

HTML
9.1 %

R
9.1 %

Shell
9.1 %
Location 🇺🇸 United States
Country Total Rank 11,887
Country Ranking

Jupyter Notebook
1,885

R
9,417

milopy

Python implementation of Milo for differential abundance testing on KNN graph

Jupyter Notebook

ST_simulation

momicsTools

A collection of resources and knowledge for analysis of scATAC+scRNA multi omics data

sc_target_evidence

Meta-analysis of drug target evidence in single-cell data

Jupyter Notebook

scATAC_prep

A not-too-orderly collection of scripts for preprocessing and dimensionality reduction of scATAC-seq data

Jupyter Notebook

multiOmic_benchmark

Comparison of multi-omic integration methods for single-cell data.

systems-bio-sc-multiomics-2022

Materials for EBI Systems Biology course

Jupyter Notebook

HexamerBias

Random hexamer bias analysis

scanpy_hacks

Jupyter Notebook

cellatacUtils

R package for handling cellatac pipeline output

multisample-sc-analysis

An overview of datasets and tools for multi-condition single-cell analysis

BS_processing

Bs-seq data processing

paperpile2remarkable

Script to automate reading and annotating papers from Paperpile library on ReMarkable tablet