brain_states

Code to reproduce analysis for "Temporal sequences of brain activity at rest are constrained by white matter structure and modulated by cognitive demands"

connectome_diffusion

Code to reproduce all network modeling analyses for Henderson et al. 2019 ("Spread of α-synuclein pathology through the brain connectome is modulated by selective vulnerability and predicted by network analysis").

fir_pca_22q

neuropathcluster

Code to reproduce all analyses for "Defining and predicting transdiagnostic categories of neurodegenerative disease"

mouse_abi_tool

Tool to pull gene expression from Allen Brain Institute API in same annotation space as structural connectome.